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Amide I Vibrational Spectroscopy Lab
24 Sep 2020 | Contributor(s):: Michael Earl Reppert, Jacob Hnatusko Wat
This tool allows users to upload/fetch protein databank files, visualize the protein structure, and calculate Amide I vibrational spectra for the protein.
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Aug 24 2020
ICANM2020: 8th International Conference & Exhibition on Advanced & Nano Materials
The 8th International Conference & Exhibition on Advanced & Nano Materials (ICANM2020) will take place from August 24 to 26 in Ottawa, Canada. This conference offers the unique...
https://nanohub.org/events/details/1814
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Molecular Spectroscopy
Tools | 12 Aug 2020 | Contributor(s):: Michael Earl Reppert
Front-end for content of Purdue course CHM676 (Molecular Spectroscopy).
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PhysiCell model for tumor hypoxia
Tools | 07 Aug 2020 | Contributor(s):: Lima Da Rocha, Heber, Paul Macklin, Furkan Kurtoglu
Multicellular simulation in 2-D of tumor hypoxia.
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COVID-19 data analysis
Tools | 07 Aug 2020 | Contributor(s):: Randy Heiland, Paul Macklin
Perform data analysis in a Jupyter notebook using data from the pc4covid19 tool.
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Multicellular modeling of SARS-CoV-2 dynamics and virion mediated cell fusion with antiviral drug effects
Tools | 27 Jul 2020 | Contributor(s):: Yafei Wang, Michael Getz, Randy Heiland, Paul Macklin
Simulate SARS-CoV-2 dynamics and virion mediated cell fusion under pharmacodynamics effects with PhysiCell
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Encapsulación y Liberación Controlada: Macro Cápsulas (Encapsulation & Controlled Release)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, James J Marti, Kyle Forgette, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo introduce el proceso de la formación de macro cápsulas y el concepto de autoensamblaje. Formar cápsulas a escalas macro, micro y nano tiene aplicaciones muy importantes en la liberación de medicamentos, cosméticos, tecnología de...
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Nanofiltración (NanoFiltration)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Sandra Weeks, Laura Arndt, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
El suministro de agua contaminada se ha convertido en un problema local en las comunidades de los Estados Unidos y el mundo. Aunque las situaciones dramáticas en Flint, Michigan y Nueva Orleans después del huracán Katrina ocuparon los titulares noticiosos, los vecindarios y...
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Nano-celulosa (Nanocellulose)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, kim Grady, Rich Wilkosz (editor), Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo le presenta a los estudiantes la nanotecnología, procesos y métodos que están siendo desarrollados para producir nano-fibras de celulosa fuertes y rígidas. El módulo está diseñado para guiar a los estudiantes a...
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Nanotratamiento del Agua (Nanotreatment)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Sandra Weeks, Laura Arndt, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo se concentra en las tecnologías que utilizan fuerzas e interacciones en la nano escala para tratar el agua. Se le presenta a los estudiantes la oportunidad de seleccionar un problema de tratamiento del agua para determinar qué contaminantes están...
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Micelas (Micelles)
Teaching Materials | 16 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Lisa Siedman, Jeanette Mowery, James J Marti, Kyle Forgette, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo introduce los conceptos de micelas y la concentración crítica de micelas (CMC, por sus siglas en inglés). Las micelas tienen aplicaciones importantes en la biotecnología. En ocasiones, se utilizan para llevar fármacos (drogas) a tejidos y...
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CompuCell3D v4 Main Tool
Tools | 08 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Base tool for CompuCell3D version 4 and greater. Allows running any of the demos included with CC3D (/CompuCell3D_Demos/Demos)
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CompuCell3D - Cells random walking at different speeds
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Cells random walking at different speeds implemented through the motility plugin
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CompuCell3d cell sorting in a hexagonal lattice
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Showcases hexagonal lattice use in CompuCell3D by simulating cell sorting by difference in contact energies in a hexagonal lattice.
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CompuCell3D - Delta-Notch signaling in a group of cells
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D can solve individual cell's ODE and have the information of one cell affect another (implemented trough SBML)
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CompuCell3D v4 - Bacterium Macrophage simulation
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Macrophage hunts bacterium in a maze
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CompuCell3D - Simulation of angiogenesis
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D simulates angiogenesis using chemical signals
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Multiscale Multicellular Modeling of Tissue Function and Disease using CompuCell3D
Online Presentations | 03 Jun 2020 | Contributor(s):: James A Glazier, Juliano Ferrari Gianlupi
Multiscale multicellular models combine representations of subcellular biological networks, cell behaviors, tissue level effects and whole body effects to describe tissue outcomes during development, homeostasis and disease. I will briefly introduce these simulation methodologies, the CompuCell3D...
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COVID 19 Virtual Tissue Model - Tissue Infection and Immune Response Dynamics
Tools | 26 May 2020 | Contributor(s):: T.J. Sego, Josua Oscar Aponte-Serrano, Juliano Ferrari Gianlupi
Simulates tissue and immune system interactions during a viral lung infection
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PhysiBoSSa: cell fate decision in TNF Boolean model
Tools | 13 May 2020 | Contributor(s):: Gerard Pradas, Arnau Montagud, Miguel Ponce de Leon
PhysiBoSSa model of the cell fate decision in TNF Boolean model in a multicellular multiscale system