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Multicellular modeling of SARS-CoV-2 dynamics and virion mediated cell fusion with antiviral drug effects
Tools | 27 Jul 2020 | Contributor(s):: Yafei Wang, Michael Getz, Randy Heiland, Paul Macklin
Simulate SARS-CoV-2 dynamics and virion mediated cell fusion under pharmacodynamics effects with PhysiCell
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Encapsulación y Liberación Controlada: Macro Cápsulas (Encapsulation & Controlled Release)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, James J Marti, Kyle Forgette, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo introduce el proceso de la formación de macro cápsulas y el concepto de autoensamblaje. Formar cápsulas a escalas macro, micro y nano tiene aplicaciones muy importantes en la liberación de medicamentos, cosméticos, tecnología de...
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Nanofiltración (NanoFiltration)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Sandra Weeks, Laura Arndt, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
El suministro de agua contaminada se ha convertido en un problema local en las comunidades de los Estados Unidos y el mundo. Aunque las situaciones dramáticas en Flint, Michigan y Nueva Orleans después del huracán Katrina ocuparon los titulares noticiosos, los vecindarios y...
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Nano-celulosa (Nanocellulose)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, kim Grady, Rich Wilkosz (editor), Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo le presenta a los estudiantes la nanotecnología, procesos y métodos que están siendo desarrollados para producir nano-fibras de celulosa fuertes y rígidas. El módulo está diseñado para guiar a los estudiantes a...
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Nanotratamiento del Agua (Nanotreatment)
Teaching Materials | 30 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Sandra Weeks, Laura Arndt, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo se concentra en las tecnologías que utilizan fuerzas e interacciones en la nano escala para tratar el agua. Se le presenta a los estudiantes la oportunidad de seleccionar un problema de tratamiento del agua para determinar qué contaminantes están...
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Micelas (Micelles)
Teaching Materials | 16 Jun 2020 | Contributor(s):: Nano-Link Center for Nanotechnology Education, Lisa Siedman, Jeanette Mowery, James J Marti, Kyle Forgette, Rodfal Alberto Rodriguez (editor), María Teresa Rivera (editor)
Este módulo introduce los conceptos de micelas y la concentración crítica de micelas (CMC, por sus siglas en inglés). Las micelas tienen aplicaciones importantes en la biotecnología. En ocasiones, se utilizan para llevar fármacos (drogas) a tejidos y...
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CompuCell3D v4 Main Tool
Tools | 08 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Base tool for CompuCell3D version 4 and greater. Allows running any of the demos included with CC3D (/CompuCell3D_Demos/Demos)
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CompuCell3D - Cells random walking at different speeds
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Cells random walking at different speeds implemented through the motility plugin
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CompuCell3d cell sorting in a hexagonal lattice
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Showcases hexagonal lattice use in CompuCell3D by simulating cell sorting by difference in contact energies in a hexagonal lattice.
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CompuCell3D - Delta-Notch signaling in a group of cells
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D can solve individual cell's ODE and have the information of one cell affect another (implemented trough SBML)
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CompuCell3D v4 - Bacterium Macrophage simulation
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Macrophage hunts bacterium in a maze
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CompuCell3D - Simulation of angiogenesis
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D simulates angiogenesis using chemical signals
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Multiscale Multicellular Modeling of Tissue Function and Disease using CompuCell3D
Online Presentations | 03 Jun 2020 | Contributor(s):: James A Glazier, Juliano Ferrari Gianlupi
Multiscale multicellular models combine representations of subcellular biological networks, cell behaviors, tissue level effects and whole body effects to describe tissue outcomes during development, homeostasis and disease. I will briefly introduce these simulation methodologies, the CompuCell3D...
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COVID 19 Virtual Tissue Model - Tissue Infection and Immune Response Dynamics
Tools | 26 May 2020 | Contributor(s):: T.J. Sego, Josua Oscar Aponte-Serrano, Juliano Ferrari Gianlupi
Simulates tissue and immune system interactions during a viral lung infection
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PhysiBoSSa: cell fate decision in TNF Boolean model
Tools | 13 May 2020 | Contributor(s):: Gerard Pradas, Arnau Montagud, Miguel Ponce de Leon
PhysiBoSSa model of the cell fate decision in TNF Boolean model in a multicellular multiscale system
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When a Cell Talks, Everyone Listens!
Teaching Materials | 06 May 2020 | Contributor(s):: Nicole Harper, NNCI Nano
This is a two part lesson focused on diffusion and cell communication. In Part 1, students will use the classic starch iodine diffusion activity. This activity can be done in any life science class. It can be used as an introduction to diffusion or as a refresher activity for advanced...
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Shape Changing Nanocontainers Tutorial
Online Presentations | 22 Apr 2020 | Contributor(s):: Vikram Jadhao
Course material companion materials for nanoparticle shape lab. Four files are associated with this course material: two video lectures, companion powerpoint slides, and a homework problem set.
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Using Biosynthesized Silver Nanoparticles to kill Antibiotic Resistant E. Coli.
Teaching Materials | 17 Apr 2020 | Contributor(s):: Michael Falck, James Marti, NNCI Nano
In this lab students will become familiar with biosynthesized silver nanoparticles, or bSNP’s. As part of the lesson, students will learn the potential of using biosynthesized silver nanoparticles for use as antimicrobials against antibiotic-resistant bacteria ...
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A virion infected-cell response tissue simulator
Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin
Simulate infected cell response to virus with PhysiCell
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A virion replication tissue simulator
Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin
Simulate virus replication dynamics with PhysiCell