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CompuCell3D - Avascular Tumor Growth and Mutation
25 May 2023 | Contributor(s):: Juliano Ferrari Gianlupi
Avascular tumor, growing on nutrient, self-limited, mutates
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Edgar Mixcoha
I want to be a scientific leader in the development of rational new drugs, vaccine design, and description of biological systems using computational chemistry approaches such as Molecular Dynamics...
https://nanohub.org/members/389676
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Jędrzej Chrzanowski
https://nanohub.org/members/372064
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Kehinde Ezekiel
Kehinde Ezekiel is an undergraduate student studying Biology at Bethune Cookman University(B-CU), Florida. She is a part of the Transdisciplinary Data Scholar Program at B-CU where she serves as a...
https://nanohub.org/members/330663
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Cancer Evolution in CompuCell3D
27 May 2021 | Contributor(s):: Juliano Ferrari Gianlupi, James A Glazier
Demonstrates implemetation of cancer evolution in CompuCell3D
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FocalPointPlasticity Plugin Demo
19 May 2021 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
This simple demo shows basic functionality of FocalPointPlasticity and how link rigidity affects cell behaviors.
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Ганна Єланська
https://nanohub.org/members/318194
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CompuCell3d cell sorting in a hexagonal lattice
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
Showcases hexagonal lattice use in CompuCell3D by simulating cell sorting by difference in contact energies in a hexagonal lattice.
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CompuCell3D - Delta-Notch signaling in a group of cells
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D can solve individual cell's ODE and have the information of one cell affect another (implemented trough SBML)
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CompuCell3D - Simulation of angiogenesis
Tools | 04 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego
CompuCell3D simulates angiogenesis using chemical signals
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Ayse Muniz
https://nanohub.org/members/197100
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Biorenewable Chemicals and Microbial Strain Engineering
Labs | 20 Sep 2016 | Contributor(s):: Abby sobh, Jamal Mawla, Steve Snyder, Alexis Ann Campbell, Nahil Sobh
This Database tool is based on “Yeast, Let’s plump it up!?” module within an undergraduate laboratory course that provides students with an authentic laboratory research experience. The module was developed at Iowa
State University, using synthetic genetic reagents generated by...
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Informatics Tool to Explore the Nanomaterial-Biological Interactions Knowledgebase
Downloads | 11 Apr 2016 | Contributor(s):: Sandra Karcher
Welcome to the resource: Informatics Tool to Explore the Nanomaterial-Biological Interactions Knowledgebase! N4mics was developed to enable cross-study exploration of the NBI Knowledgebase with the goal of identifying relationships between nanomaterial characteristics and biological responses....
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[Illinois] Physics 550 Biomolecular Physics
Courses | 05 Sep 2013 | Contributor(s):: Klaus Schulten, Taekjip Ha
Physical concepts governing the structure and function of biological macromolecules; general properties, spatial structure, energy levels, dynamics and functions, and relation to other complex physical systems such as glasses; recent research in biomolecular physics;...
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[Illinois] Introduction to Bioinformatics Lecture 16 - Clustering of Microarray Data II, Class prediction from Microarray data
Online Presentations | 17 May 2013 | Contributor(s):: Saurabh Sinha
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[Illinois] Introduction to Bioinformatics Lecture 17 - RNA Secondary Structure Prediction
Online Presentations | 17 May 2013 | Contributor(s):: Saurabh Sinha
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[Illinois] Introduction to Bioinformatics Lecture 18 - Evolutionary Tree Reconstruction
Online Presentations | 17 May 2013 | Contributor(s):: Saurabh Sinha
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[Illinois] Introduction to Bioinformatics Lecture 19 - Proteomics
Online Presentations | 17 May 2013 | Contributor(s):: Saurabh Sinha
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[Illinois] Introduction to Bioinformatics Lecture 14 - Statistical Testing II and Microarrays
Online Presentations | 06 Jan 2013 | Contributor(s):: Saurabh Sinha
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[Illinois] Introduction to Bioinformatics Lecture 12 - Gene Finding
Online Presentations | 10 Apr 2012 | Contributor(s):: Saurabh Sinha