Integrating Programming and Cheminformatics into the Molecular Science Curriculum: Resources from the Molecular Sciences Software Institute using nanoHUB

By Ashley Ringer McDonald

Chemistry & Biochemistry, Cal Poly, San Luis Obispo, CA

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Abstract

Run the Tool: Python for CheminformaticsThis presentation will describe open-source curriculum from the Molecular Sciences Software Institute (the MolSSI) to teach programming and cheminformatics using nanoHUB. The MolSSI is an NSF-funded institute that aims to improve software, education, and training in the computational molecular sciences. MolSSI offers a wide range of educational resources that teach topics such as programming, best practices in software development, modular modeling, and cheminformatics, all in the context of computational molecular science and engineering. Faculty are welcome to adopt or adapt any of these resources for their courses. This presentation will describe MolSSI resources available on nanoHUB, particularly highlighting a cheminformatics module that has recently been published as a nanoHUB tool.

Bio

Ashley Ringer McDonald Ashley Ringer McDonald is a Professor of Chemistry at Cal Poly San Luis Obispo. She received her bachelor’s degree from Mississippi College and her Ph.D. from the Georgia Institute of Technology. Her research focuses on using multiscale modeling to study molecular interactions in complex chemical contexts. She serves on the Board of Directors for the Molecular Sciences Software Institute (the MolSSI), where she is the Director for Education, Training, and Faculty Development.

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Researchers should cite this work as follows:

  • Ashley Ringer McDonald (2024), "Integrating Programming and Cheminformatics into the Molecular Science Curriculum: Resources from the Molecular Sciences Software Institute using nanoHUB," https://nanohub.org/resources/38483.

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Integrating Programming and Cheminformatics into the Molecular Science Curriculum
  • Integrating Programming and Cheminformatics into the Molecular Sciences Curriculum 1. Integrating Programming and Ch… 0
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  • The Molecular Sciences Software Institute 2. The Molecular Sciences Softwar… 130.59726393059728
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  • MolSSI Board of Directors 3. MolSSI Board of Directors 178.57857857857857
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  • MolSSI Software Scientists 4. MolSSI Software Scientists 192.95962629295963
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  • MolSSI Education's Mission 5. MolSSI Education's Mission 246.54654654654655
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  • MolSSI Python Data and Scripting 7. MolSSI Python Data and Scripti… 488.08808808808811
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  • MolSSI Best Practices in Python Development 9. MolSSI Best Practices in Pytho… 660.22689356022693
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  • Finding MolSSI Tutorials Online 10. Finding MolSSI Tutorials Onlin… 751.01768435101769
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  • Accessing MolSSI Resources through nanoHUB 11. Accessing MolSSI Resources thr… 857.05705705705714
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  • Opportunities with the MolSSI 18. Opportunities with the MolSSI 2017.4507841174509
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  • Thank You 19. Thank You 2406.5732399065732
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  • Making Data and Simulations Pervasive 20. Making Data and Simulations Pe… 2677.610944277611
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  • General Chemistry 21. General Chemistry 2693.25992659326
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