This talk presents the CompuCell3D and Tissue Forge modeling and simulation environments. The scope, basic capabilities, and select features of both software packages are surveyed. Projects with immediate relevance to scientific research and education communities are then presented in the form of software development. Opportunities span software applications that include visualization pipeline development, software developer support, and front-end development in a Jupyter Notebook.

Micro Nano Technology Collaborative Undergraduate Research Network (MNT-CURN)

Researchers should cite this work as follows:

• T.J. Sego, The Micro Nano Technology - Education Center (2023), "Developing Software Tools in Computational Biology," https://nanohub.org/resources/38245.

  BibTex | EndNote

1. ATE Centers
2. CompuCell3D
3. computational biology
4. Jupyter notebooks
5. MNT-CURN
6. MNT-EC
7. Tissue Forge