Interactive Modeling of Materials with Density Functional Theory Using the Quantum ESPRESSO Interface within the MIT Atomic Scale Modeling Toolkit

By Enrique Guerrero

Department of Physics, University of California, Merced, CA

Published on

Abstract

Run the Tool: MIT Atomic-Scale Modeling Toolkit We will explore the Quantum ESPRESSO interface within the MIT Atomic-Scale Modeling Toolkit with interactive examples. We will review the basics of density functional theory and then focus on the tool’s capabilities. This module has been used to aid in teaching condensed matter physics and could be reasonably used as a pedagogical tool in a range of courses including density functional theory, materials physics, computational physics, or similar courses. The interface is built to be simple, allowing easy-to-follow instructions to be written for students to compute. We will study examples of computing the kinetic energy cutoff, structural relaxation, Young’s modulus, electronic band structure, and Raman spectroscopy of MoS2, Si, and C systems. The tool can be used to compute some physical properties of materials by atomic-scale modeling and data is displayed live or could be plotted externally.

The handout that is presented in this presentation can be found here: A Guide to the MIT Atomic Scale Modeling Toolkit for nanoHUB.org.

This presentation is part 2, part 1 can be viewed here: A Condensed Matter Physics class and a Course-Based Undergraduate Research Experience (CURE) with the MIT Atomic-Scale Modeling Toolkit, and part 3 can be viewed here: Teaching and Learning with the MIT Atomic Scale Modeling Toolkit's Classical and Quantum Atomic Modeling Applications.

Bio

Dr. Enrique Guerrero is a developer of the MIT Atomic Scale Modeling Toolkit since 2021 and has an expertise in computational physics. He received his B.S. in Physics with a focus on Astronomy at Humboldt State University (now Cal Poly Humboldt) in 2015 and earned his Physics M.S. and Ph.D. the University of California, Merced in 2022. His work on applying mixed computational methods to study the 2D material MoS2 and the amorphous material a-Si is scheduled to be released February 2023. This work uses classical Monte Carlo methods and first principles density functional theory methods that underly the MIT Atomic-ScaleModeling Toolkit’s ESPRESSO module. Dr. Guerrero has recently focused on pedagogy and is currently searching for a physics faculty position.

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Cite this work

Researchers should cite this work as follows:

  • Enrique Guerrero (2022), "Interactive Modeling of Materials with Density Functional Theory Using the Quantum ESPRESSO Interface within the MIT Atomic Scale Modeling Toolkit," https://nanohub.org/resources/36650.

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Interactive Modeling of Materials with Density Functional Theory Using the Quantum ESPRESSO Interface within the MIT Atomic Scale Modeling Toolkit
  • Quantum ESPRESSO with the MIT Atomic Scale Toolkit 1. Quantum ESPRESSO with the MIT … 0
    00:00/00:00
  • Overview 2. Overview 73.173173173173183
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  • Previously… 3. Previously… 105.87253920587254
    00:00/00:00
  • Resources for introduction to density functional theory 4. Resources for introduction to … 243.04304304304304
    00:00/00:00
  • DFT with Quantum ESPRESSO 5. DFT with Quantum ESPRESSO 327.86119452786119
    00:00/00:00
  • Example density functional theory computations for diamond silicon 6. Example density functional the… 472.97297297297297
    00:00/00:00
  • MIT Stomic-Scale Modeling Toolkit 7. MIT Stomic-Scale Modeling Tool… 507.80780780780782
    00:00/00:00
  • I. Introduction 8. I. Introduction 587.42075408742073
    00:00/00:00
  • II. Getting Started 9. II. Getting Started 716.54988321654992
    00:00/00:00
  • III. Explore input and output interfaces 10. III. Explore input and output … 847.71438104771437
    00:00/00:00
  • IV. Example: Silicon Wavefunction Kinetic Energy Cutoff 11. IV. Example: Silicon Wavefunct… 1090.7240573907241
    00:00/00:00
  • V. Example: Silicon Bulk Modulus 12. V. Example: Silicon Bulk Modul… 2201.5015015015015
    00:00/00:00
  • VI. Example: Silicon Density of States and Band Structure 13. VI. Example: Silicon Density o… 2681.4814814814818
    00:00/00:00
  • VII. Example: Silicon Phonon Frequencies an Raman Intensities 14. VII. Example: Silicon Phonon F… 3192.0253586920253
    00:00/00:00
  • Quantum Espresso Tutorials 15. Quantum Espresso Tutorials 3702.7360694027361
    00:00/00:00
  • Input File Description 16. Input File Description 3726.5265265265266
    00:00/00:00