CHEM 870: Computational Methods in Chemistry - Electronic Structure

By Nicole Adelstein

Chemistry and Biochemistry, San Francisco State University, San Francisco, CA

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Courses

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Abstract

Computational Methods in Chemistry is a course that introduces the theory and practice (skills) necessary to perform electronic structure calculations.

Course Objectives:

At the completion of this section of the course, students will be able to:

  1. Apply approximations to quantum chemistry to solve for the electronic structure and properties of molecules and solids
  2. Identify the limitations of certain approximations to creating simulations that accurately model real molecules or systems.
  3. Identify the cost versus benefit of running more accurate simulations and identify the rationale for a certain level of accuracy is chosen for a given simulations.

Topics:

  • Variational Methods (review)
  • Hartree-Fock (HF) & Slater Determinants
  • HF Restricted vs. Unrestricted
  • Potential Energy Surfaces
  • Gaussian Basis Sets
  • Vibrational modes
  • Density Functional Theory & Binding Energies

There are lecture slides that correspond with the Tutorials:
At a future date, a full set of lectures will be available.

  • Lecture 1 slides go with Tutorial 1 and 2
  • Lecture 6 slides go with Tutorial 3 and 4
  • Lecture 11 slides go with Tutorial 5
  • Lecture 13 slides go with Tutorial 6

Run ORCA ToolSimulation Software Used:

Tutorial Solution Sets:

Solution sets for the tutorials are available to qualified instructors/educators, please join the group Chemistry Instructors for access.

References

  • F. Jensen, Introduction to Computational Chemistry
  • McQuarrie, Quantum Chemistry
  • R. Martin, Electron Structure: Basic Theory and Practical Methods, Cambridge University Press, 2008.
  • C. Kittel, Introduction to Solid State Physics, Wiley, 2004.
  • D. Frenkel & B. Smit, Understanding Molecular Simulation, Second Edition, Academic Press, 2001

Cite this work

Researchers should cite this work as follows:

  • Nicole Adelstein (2021), "CHEM 870: Computational Methods in Chemistry - Electronic Structure," https://nanohub.org/resources/35383.

    BibTex | EndNote

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Chemistry Instructors

Chemistry Instructors group image

Lecture Number/Topic Online Lecture Video Lecture Notes Supplemental Material Suggested Exercises
CHEM 870 Lecture 01: Introduction and Variational Method Review View HTML
View Notes (pdf)
Homework
CHEM 870 Lecture 02: Hartree-Fock Continued, Slater Determinants View HTML
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CHEM 870 Tutorial 01a: Getting to know nanoHUB and Ab-initio Calculations View Tutorial 1 Assignment
Tutorial 1 Assignment
CHEM 870 Lecture 03: Hartree-Fock and Electron Correlation View HTML
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CHEM 870 Tutorial 01b: Getting to know nanoHUB and Ab-initio Calculations - Tasks 4 & 5 View
CHEM 870 Lecture 04: The Secular Equation View HTML
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CHEM 870 Tutorial 2: Exploring nanoHUB – Ionization Energies and Missing Correlation View Tutorial 2 Assignment
The goal of these activities is to explore more capabilities of nanoHUB, including calculating the ionization energy. In addition, you will learn to estimate the missing correlation energy in...

CHEM 870 Lecture 05: Open Shell, Restricted vs unrestricted using Gaussian View HTML
View Notes (pdf)
CHEM 870 Tutorial 3: Gaussian, Charge Density and Spin Density View Tutorial 3 Assignment
There are many goals of this tutorial: To learn to run Gaussian, one of the most ubiquitous computational chemistry software packages in the world. To create text input files and submit simulations...

CHEM 870 Lecture 06: Exchange Energy and the Fermi Hole View HTML
View
CHEM 870 Lecture 07: Gaussian Basis Sets View HTML
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CHEM 870 Tutorial 4: Basis Sets, Geometry Optimization, and Configuration Interaction View Tutorial 4 Assignment
CHEM 870 Lecture 08: Configuration Interaction View HTML
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CHEM 870 Lecture 09: Vibrational Modes View HTML
View Notes (pdf)
CHEM 870 Tutorial 5: Normal Modes and IR Spectroscopy View Tutorial 5 Assignment
CHEM 870 Lecture 10: Infrared and Raman Spectrocopy View HTML
View
CHEM 870 Tutorial 6a: Binding Energy, DFT, and CO2 Capture I View Notes (pdf)
Tutorial 6 Assignment
CHEM 870 Tutorial 6b: Binding Energy, DFT, and CO2 Capture II View
CHEM 870 Lecture 11: Summary of Ab-initio Computational Chemistry View
CHEM 870 Tutorials 1-5: Solution Sets Download Bundle (contains all documents)
Tutorial 1 Solution
Tutorial 2 Solution
Tutorial 3 Solution
Tutorial 4 Solution
Tutorial 5 Solution