Tools (41-60 of 149)

1. Motility Training App

   Tools | 20 Sep 2019 | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus, Kali Nicole Konstantinopoulos, Mary Chen, Drew Willis, Randy Heiland, Paul Macklin

   Training application for "Motility" concept in PhysiCell.

2. Tellurium

   Tools | 26 Aug 2019 | Contributor(s):: Somogyi, Andy T

   1.0

3. Multi-species Biofilm on Wound Surface

   Tools | 01 May 2019 | Contributor(s):: Furkan Kurtoglu, Aneequa Sundus

   This is a class project that aims modeling two-species biofilm that grows on a wound

4. AMIGOS - Hypoxia

   Tools | 25 Apr 2019 | Contributor(s):: Furkan Kurtoglu, John Metzcar, Kali Nicole Konstantinopoulos, Timothy M Mahajan, Randy Heiland, Paul Macklin

   Modeling Tumor in Hypoxic Condition

5. PhysiCell: infected system and off-site immune system

   Tools | 23 Apr 2019 | Contributor(s):: Parichit Sharma, Yafei Wang

   Studying the interaction between an ODE driven offsite system and a system under invasion through Agent Based Modelling in PhysiCell.

6. Replication Competent Oncolytic Virus expressing secretable trimeric TRAIL: hypothesis testing

   Tools | 23 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

   Using PhysiCell to simulate a replication competent oncolytic virus expressing secretable trimeric TRAIL which induces apoptosis in nearby cells

7. Wound Healing - Physicell

   Tools | 22 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Vedang Narain

   Wound healing simulation using physicell

8. Replication Competent Oncolytic Virus in Epithelial cell layer

   Tools | 18 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

   PhysiCell simulation of a replication competent oncolytic virus release from two veins, diffusing through a layer of epithelial cells.

9. CompuCell3D - Bacterium Macrophage

   Tools | 17 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

   Simulation of macrophage chasing bacterium

10. Spatial Pattern Formation in Cell Based Models

    Tools | 17 Apr 2019 | Contributor(s):: Ben Duggan, John Metzcar

    Exploring spatial pattern formation in cell-based models, starting with Turing patterns in PhysiCell

11. Polyvalent Nanoparticle Binding Simulator

    Tools | 16 Apr 2019 | Contributor(s):: Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao

    Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction

12. (CC3D v3 - old) CompuCell3D Vascular Tumor

    Tools | 16 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Somogyi, Andy T

    Simulate 3D vascular tumor with CompuCell3D

13. PhysiCell: liver tissue mechanobiology

    Tools | 15 Apr 2019 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    An ABM simulating the impact of tumor-parenchyma biomechanics on liver metastatic progression with PhysiCell

14. PhysiCell_mscb_class

    Tools | 12 Apr 2019 | Contributor(s):: Yafei Wang

    simulation of ABM model

15. PhysiCell: biased random migration demonstrator

    Tools | 22 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell demonstration of biased random cell migration

16. PhysiCell cancer-immune model

    Tools | 21 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell model of immune cells attacking a heterogeneous tumor

17. PhysiCell for tumor heterogeneity

    Tools | 12 Feb 2019 | Contributor(s):: Randy Heiland, Paul Macklin

    2D simulation of tumor heterogeneity

18. PhysiCell: invader-scout-attacker system

    Tools | 05 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell model of an invader-scout-attacker multicellular system

19. PhysiCell cancer biorobots simulation

    Tools | 28 Jan 2019 | Contributor(s):: Randy Heiland, Paul Macklin

    2D simulation of biorobots delivering a drug to cancer cells

20. Nanoparticle Assembly Lab

    Tools | 28 Jan 2019 | Contributor(s):: Nicholas Brunk, JCS Kadupitiya, Masaki Uchida, Douglas, Trevor, Vikram Jadhao

    Simulate assembly of nanoparticles into aggregates in physiological conditions.