cc3d Files - What are they?

by Joseph M. Cychosz

Version 3
by (unknown)
Version 4
by (unknown)

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1 == What is it? ==
2
3 '''.cc3d''' files are the simulation project files for use with !CompuCell3D. They essentially are an XML file that is stored in a directory with the other simulation files. '''.cc3d''' files were introduced in to !CompuCell3D version 3.6.0.
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5 ===An Example:===
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Below is a simple example of a '''.cc3d''' file. It essentially defines all the files need for the simulation. In this case the simulation files reside in the directory '''Simulation''' which resides in the same directory as the '''.cc3d''' file.
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Below is a simple example of a '''.cc3d''' file. It defines all the files need for the simulation. In this case the simulation files reside in the directory '''Simulation''' which resides in the same directory as the '''.cc3d''' file.
7 {{{
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9 Simulation/Cellsort.xml
10 Simulation/Cellsort.py
11 Simulation/CellsortSteppables.py
12 Simulation/Cellsort.piff
13 Simulation/FGF.txt
14
15 }}}
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17 For further details on the format of a .cc3d file see [https://compucell3dreferencemanual.readthedocs.io/en/4.2.4/cc3d_project_files.html Managing CompuCell3D simulations (CC3D project files)]
18 == How do I open it? ==
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20 These files are intended to be used with !CompuCell3D. This tool can be [https://nanohub.org/tools/compucell3d/ found here on nanoHUB ]
21 == For more information==
22 See [https://compucell3d.org/]
23 or [https://nanohub.org/groups/nanobio/tools]