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Large language model competition for LAMMPS
20 Mar 2024 | Contributor(s):: Ethan Holbrook, Saswat Mishra, Juan Carlos Verduzco Gastelum, William Zummo, Kat Nykiel, Alejandro Strachan
Large language model competition for LAMMPS
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Large Language model demonstration for LAMMPS
08 Jan 2024 | Contributor(s):: Ethan Holbrook, Juan Carlos Verduzco Gastelum, Saswat Mishra, Kat Nykiel, William Zummo, Alejandro Strachan
Large Language model demonstration for LAMMPS
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MIT Atomic-Scale Modeling Toolkit
Tools | 15 Jan 2008 | Contributor(s):: David A Strubbe, Enrique Guerrero, daniel richards, Elif Ertekin, Jeffrey C Grossman, Justin Riley
Tools for Atomic-Scale Modeling
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Parsimonious neural networks
Tools | 06 Jul 2020 | Contributor(s):: Saaketh Desai, Alejandro Strachan
Design and train neural networks in conjunction with genetic algorithms to discover equations directly from data
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Refractory Complex Concentrated Alloy Melting Point Calculation
Tools | 25 May 2020 | Contributor(s):: Zachary D McClure, Saaketh Desai, Alejandro Strachan
Calculate melting point of BCC-type high entropy alloys through phase coexistence method
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Test Tool for Neural Network Reactive Force Field for CHNO systems
Tools | 30 Apr 2020 | Contributor(s):: Pilsun Yoo, Saaketh Desai, Michael N Sakano, Peilin Liao, Alejandro Strachan
Run molecular dynamics and Do testing using the neural network reactive force field for HE materials
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High Entropy Alloy Melting Point Calculation
Tools | 19 Feb 2020 | Contributor(s):: Zachary D McClure, Saaketh Desai, Alejandro Strachan
Calculate melting point of high entropy alloys through phase coexistence method
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Nanoparticle Shape Lab
Tools | 23 Dec 2019 | Contributor(s):: JCS Kadupitiya, Nicholas E. Brunk, Vikram Jadhao
Simulates the low-energy shapes of nanocontainers over a wide range of solution conditions
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LAMMPS Input Structure Generator for Functionally Graded Materials (FGM)
Tools | 17 Nov 2019 | Contributor(s):: Md Shajedul Hoque Thakur, Mahmudul Islam, Abdullah Amin, Satyajit Mojumder, Md Mahbubul Islam
Generates initial geometries of Functionally Graded Materials (FGM) for LAMMPS simulations
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Polyvalent Nanoparticle Binding Simulator
Tools | 10 Apr 2019 | Contributor(s):: Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao
Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction
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Melting point simulation using OpenKIM
Tools | 21 Mar 2019 | Contributor(s):: Martin Hunt, Alejandro Strachan, Saaketh Desai
Computes melting point using a coexistence technique using interatomic potentials from OpenKIM
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Jupyter Examples
Tools | 17 Mar 2019 | Contributor(s):: Martin Hunt
Users Manual and Examples for Jupyter
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LAMMPS driver tool for potential calibration
Tools | 15 Feb 2019 | Contributor(s):: Saaketh Desai, Alejandro Strachan
Calculates basic properties of interest with a given interatomic potential and is used to drive the calibration of the potential.
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Nanoparticle Assembly Lab
Tools | 22 Jan 2019 | Contributor(s):: Nicholas Brunk, JCS Kadupitiya, Masaki Uchida, Douglas, Trevor, Vikram Jadhao
Simulate assembly of nanoparticles into aggregates in physiological conditions.
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FunUQ for MD
Tools | 24 Jun 2018 | Contributor(s):: Sam Reeve, Alejandro Strachan
Functional uncertainty quantification for molecular dynamics
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Simulation based Thermal Design Framework for Accelerated Structure exploration (STEDFAST)
Tools | 28 Jun 2018 | Contributor(s):: Prabudhya Roy Roy Chowdhury, Adam Sandor Garrett, Colleen Reynolds, Xiulin Ruan
Perform a genetic algorithm to optimize superlattice structures.
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LAMMPS Structure Analysis Toolkit
Tools | 07 Dec 2017 | Contributor(s):: Nicholas J Finan, Saaketh Desai, Sam Reeve, Alejandro Strachan
Perform structural analysis on trajectories in LAMMPS dump format
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Ions in Nanoconfinement
Tools | 06 Dec 2017 | Contributor(s):: Kadupitige Kadupitiya, Nasim Anousheh, Suresh Marru, Fox, Geoffrey C., Vikram Jadhao
The Ions in Nanoconfinement app empowers users to simulate ions confined between material surfaces that are nanometers apart, and extract the associated ionic structure.
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LAMMPS Data-File Generator
Tools | 01 Aug 2017 | Contributor(s):: Carlos Miguel Patiño, Lorena Alzate-Vargas, Chunyu Li, Benjamin P Haley, Alejandro Strachan
The LAMMPS Data-File Generator generates LAMMPS data files to perform molecular dynamics simulations in LAMMPS using Dreiding or PCFF force field energy terms
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Atomistic Polymer Workflow Notebook
Tools | 19 Oct 2017 | Contributor(s):: Benjamin P Haley
Run PolymerModeler and nuSIMM tools to create atomistic polymer systems