Resources (101-120 of 173)

1. Wound Healing - Physicell

   Tools | 22 Apr 2019 | Contributor(s):: Juliano Ferrari Gianlupi, Vedang Narain

   Wound healing simulation using physicell

2. Jupyter Notebook (201904)

   Tools | 18 Apr 2019

   Starts the Jupyter notebook server in your home directory.

3. Replication Competent Oncolytic Virus in Epithelial cell layer

   Tools | 18 Apr 2019 | Contributor(s):: Adrianne Jenner, Paul Macklin

   PhysiCell simulation of a replication competent oncolytic virus release from two veins, diffusing through a layer of epithelial cells.

4. Spatial Pattern Formation in Cell Based Models

   Tools | 17 Apr 2019 | Contributor(s):: Ben Duggan, John Metzcar

   Exploring spatial pattern formation in cell-based models, starting with Turing patterns in PhysiCell

5. Polyvalent Nanoparticle Binding Simulator

   Tools | 16 Apr 2019 | Contributor(s):: Nilsson, Lauren, JCS Kadupitiya, Vikram Jadhao

   Simulates the binding of ligand-decorated nanoparticles to cell membrane driven by ligand-cell-receptor attraction

6. PhysiCell_mscb_class

   Tools | 12 Apr 2019 | Contributor(s):: Yafei Wang

   simulation of ABM model

7. Melting point simulation using OpenKIM

   Tools | 22 Mar 2019 | Contributor(s):: Martin Hunt, Alejandro Strachan, Saaketh Desai

   Computes melting point using a coexistence technique using interatomic potentials from OpenKIM

8. Calibration using DAKOTA

   Tools | 21 Mar 2019 | Contributor(s):: Saaketh Desai, Alejandro Strachan

   Uses DAKOTA to perform deterministic and Bayesian calibration

9. Jupyter Examples

   Tools | 19 Mar 2019 | Contributor(s):: Martin Hunt

   Users Manual and Examples for Jupyter

10. PhysiCell: biased random migration demonstrator

    Tools | 22 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell demonstration of biased random cell migration

11. PhysiCell cancer-immune model

    Tools | 21 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell model of immune cells attacking a heterogeneous tumor

12. Composite Filament Simulation 3D

    Tools | 15 Feb 2019 | Contributor(s):: Zachary Yun, Michelle Zhang, Ganesh Vurimi, Hayden Taylor, Sixian Jia

    Simulate electrical properties of a nanowire composite filament.

13. Solidification Simulation of Pure Metal in Semi-Infinite Mold

    Tools | 12 Feb 2019 | Contributor(s):: Michael S Titus, Justin Cooper, Dongsheng Wen

    Simulate the solidification of various pure metals in various mold materials. Adjust mold and metal properties.

14. PhysiCell for tumor heterogeneity

    Tools | 12 Feb 2019 | Contributor(s):: Randy Heiland, Paul Macklin

    2D simulation of tumor heterogeneity

15. Machine Learning for Materials Science: Part 1

    Tools | 09 Feb 2019 | Contributor(s):: Juan Carlos Verduzco Gastelum, Alejandro Strachan, Saaketh Desai

    Machine learning and data science tools applied to materials science

16. PhysiCell: invader-scout-attacker system

    Tools | 05 Feb 2019 | Contributor(s):: Paul Macklin, Randy Heiland

    PhysiCell model of an invader-scout-attacker multicellular system

17. PhysiCell cancer biorobots simulation

    Tools | 28 Jan 2019 | Contributor(s):: Randy Heiland, Paul Macklin

    2D simulation of biorobots delivering a drug to cancer cells

18. Nanoparticle Assembly Lab

    Tools | 28 Jan 2019 | Contributor(s):: Nicholas Brunk, JCS Kadupitiya, Masaki Uchida, Douglas, Trevor, Vikram Jadhao

    Simulate assembly of nanoparticles into aggregates in physiological conditions.

19. Kirigami Design and Analysis

    Tools | 28 Jan 2019 | Contributor(s):: Subhadeep De, Darren K Adams

    Design and mechanical analysis of Kirigami structures

20. DFT-LDA Helium

    Tools | 06 Dec 2018 | Contributor(s):: Dongsheng Wen, Alejandro Strachan

    Calculate ground state energy of Helium atom with DFT.