Tools (1-12 of 12)

1. PhysiCell COVID19 model v6 test

   11 Feb 2022 | Contributor(s):: Randy Heiland, Paul Macklin

   PhysiCell COVID19 model v6 early testing

2. Modeling a COVID-19 Pandemic with a BSVIRD Model

   Tools | 28 Jan 2021 | Contributor(s):: Brian Yu, James A Glazier (editor), Josua Oscar Aponte-Serrano (editor)

   This model emulates the introduction of a two-dose vaccine in a COVID-19 pandemic, focusing on the United States.

3. A Vaccine Model for COVID-19

   Tools | 25 Jan 2021 | Contributor(s):: Kali Nicole Konstantinopoulos, James A Glazier (editor), Josua Oscar Aponte-Serrano (editor)

   Simulate the introduction of a vaccine in the COVID-19 pandemic, focused on the US.

4. PhysiBoSS simulation of COVID19 infection

   Tools | 27 Oct 2020 | Contributor(s):: Vincent Noel, Miguel Ponce de Leon, Anna Niarakis, Laurence Calzone, Alfonso Valencia, Arnau Montagud

   PhysiBoSS-COVID: the Boolean modelling of COVID-19 signalling pathways in a multicellular simulation framework

5. COVID-19 data analysis

   Tools | 07 Aug 2020 | Contributor(s):: Randy Heiland, Paul Macklin

   Perform data analysis in a Jupyter notebook using data from the pc4covid19 tool.

6. Multicellular modeling of SARS-CoV-2 dynamics and virion mediated cell fusion with antiviral drug effects

   Tools | 27 Jul 2020 | Contributor(s):: Yafei Wang, Michael Getz, Randy Heiland, Paul Macklin

   Simulate SARS-CoV-2 dynamics and virion mediated cell fusion under pharmacodynamics effects with PhysiCell

7. CompuCell3D v4 Main Tool

   Tools | 08 Jun 2020 | Contributor(s):: Juliano Ferrari Gianlupi, T.J. Sego

   Base tool for CompuCell3D version 4 and greater. Allows running any of the demos included with CC3D (/CompuCell3D_Demos/Demos)

8. COVID 19 Virtual Tissue Model - Tissue Infection and Immune Response Dynamics

   Tools | 26 May 2020 | Contributor(s):: T.J. Sego, Josua Oscar Aponte-Serrano, Juliano Ferrari Gianlupi

   Simulates tissue and immune system interactions during a viral lung infection

9. A virion infected-cell response tissue simulator

   Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

   Simulate infected cell response to virus with PhysiCell

10. A virion replication tissue simulator

    Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    Simulate virus replication dynamics with PhysiCell

11. A virion endocytosis tissue simulator

    Tools | 13 Apr 2020 | Contributor(s):: Yafei Wang, Randy Heiland, Paul Macklin

    Simulate virus endocytosis (internalization), ACE2 receptor dynamics with PhysiCell

12. PhysiCell model for COVID19

    Tools | 26 Mar 2020 | Contributor(s):: Randy Heiland, Yafei Wang, Paul Macklin

    Prototype 2-D multicellular simulation of COVID19.